IL_4V9C_203

3D structure

PDB id

4V9C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Allosteric control of the ribosome by small-molecule antibiotics

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

AUAC*GUGUUU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9C_203 not in the Motif Atlas

Geometric match to IL_8P9A_467

Geometric discrepancy: 0.3872

The information below is about IL_8P9A_467

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_07469.3

Basepair signature

cWW-tSH-cWW-cSH-R-cWW

Number of instances in this motif group

3

Unit IDs

4V9C|1|BA|A|2459
4V9C|1|BA|U|2460
4V9C|1|BA|A|2461
4V9C|1|BA|C|2462
*
4V9C|1|BA|G|2488
4V9C|1|BA|U|2489
4V9C|1|BA|G|2490
4V9C|1|BA|U|2491
4V9C|1|BA|U|2492
4V9C|1|BA|U|2493

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BM

50S ribosomal protein L16