3D structure

PDB id
4V9C (explore in PDB, NAKB, or RNA 3D Hub)
Description
Allosteric control of the ribosome by small-molecule antibiotics
Experimental method
X-RAY DIFFRACTION
Resolution
3.3 Å

Loop

Sequence
GGAUAACU*AGCUAAUAC
Length
17 nucleotides
Bulged bases
4V9C|1|CA|U|173
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V9C|1|CA|G|147
4V9C|1|CA|G|148
4V9C|1|CA|A|149
4V9C|1|CA|U|150
4V9C|1|CA|A|151
4V9C|1|CA|A|152
4V9C|1|CA|C|153
4V9C|1|CA|U|154
*
4V9C|1|CA|A|167
4V9C|1|CA|G|168
4V9C|1|CA|C|169
4V9C|1|CA|U|170
4V9C|1|CA|A|171
4V9C|1|CA|A|172
4V9C|1|CA|U|173
4V9C|1|CA|A|174
4V9C|1|CA|C|175

Current chains

Chain CA
16S ribosomal RNA

Nearby chains

Chain CT
30S ribosomal protein S20

Coloring options:

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