IL_4V9C_368

3D structure

PDB id

4V9C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Allosteric control of the ribosome by small-molecule antibiotics

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UGG*UCA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9C_368 not in the Motif Atlas

Homologous match to IL_4WF9_053

Geometric discrepancy: 0.2961

The information below is about IL_4WF9_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9C|1|DA|U|1406
4V9C|1|DA|G|1407
4V9C|1|DA|G|1408
*
4V9C|1|DA|U|1594
4V9C|1|DA|C|1595
4V9C|1|DA|A|1596

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain DT

50S ribosomal protein L23