IL_4V9C_446

3D structure

PDB id

4V9C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Allosteric control of the ribosome by small-molecule antibiotics

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UAGGUAGC*GCGCUUA

Length

15 nucleotides

Bulged bases

4V9C|1|AA|U|1464

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9C|1|AA|U|1436
4V9C|1|AA|A|1437
4V9C|1|AA|G|1438
4V9C|1|AA|G|1439
4V9C|1|AA|U|1440
4V9C|1|AA|A|1441
4V9C|1|AA|G|1442
4V9C|1|AA|C|1443
*
4V9C|1|AA|G|1459
4V9C|1|AA|C|1460
4V9C|1|AA|G|1461
4V9C|1|AA|C|1462
4V9C|1|AA|U|1463
4V9C|1|AA|U|1464
4V9C|1|AA|A|1465

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AT

30S ribosomal protein S20

Chain BA

Large subunit ribosomal RNA; LSU rRNA

Chain BP

50S ribosomal protein L19