IL_4V9C_450

3D structure

PDB id

4V9C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Allosteric control of the ribosome by small-molecule antibiotics

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CCCAGACAGCC*GGUCGAG

Length

18 nucleotides

Bulged bases

4V9C|1|BA|C|1045, 4V9C|1|BA|A|1046, 4V9C|1|BA|C|1052

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9C|1|BA|C|1043
4V9C|1|BA|C|1044
4V9C|1|BA|C|1045
4V9C|1|BA|A|1046
4V9C|1|BA|G|1047
4V9C|1|BA|A|1048
4V9C|1|BA|C|1049
4V9C|1|BA|A|1050
4V9C|1|BA|G|1051
4V9C|1|BA|C|1052
4V9C|1|BA|C|1053
*
4V9C|1|BA|G|1106
4V9C|1|BA|G|1107
4V9C|1|BA|U|1108
4V9C|1|BA|C|1109
4V9C|1|BA|G|1110
4V9C|1|BA|A|1111
4V9C|1|BA|G|1112

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B4

50S ribosomal protein L36

Chain BG

50S ribosomal protein L6