IL_4V9D_130
3D structure
- PDB id
- 4V9D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of the bacterial ribosome in classical and hybrid states of tRNA binding
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CUGC*GAGGAAG
- Length
- 11 nucleotides
- Bulged bases
- 4V9D|1|BA|U|1159
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9D_130 not in the Motif Atlas
- Geometric match to IL_4LFB_050
- Geometric discrepancy: 0.1881
- The information below is about IL_4LFB_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_32376.1
- Basepair signature
- cWW-cSH-cWW-tWH-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
4V9D|1|BA|C|1158
4V9D|1|BA|U|1159
4V9D|1|BA|G|1160
4V9D|1|BA|C|1161
*
4V9D|1|BA|G|1175
4V9D|1|BA|A|1176
4V9D|1|BA|G|1177
4V9D|1|BA|G|1178
4V9D|1|BA|A|1179
4V9D|1|BA|A|1180
4V9D|1|BA|G|1181
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain BB
- 30S ribosomal protein S2
- Chain BI
- 30S ribosomal protein S9
Coloring options: