IL_4V9I_087
3D structure
- PDB id
- 4V9I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CC*GAG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9I_087 not in the Motif Atlas
- Homologous match to IL_4WF9_028
- Geometric discrepancy: 0.0934
- The information below is about IL_4WF9_028
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_90729.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 30
Unit IDs
4V9I|1|BA|C|883
4V9I|1|BA|C|884
*
4V9I|1|BA|G|984
4V9I|1|BA|A|985
4V9I|1|BA|G|986
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain B8
- 50S ribosomal protein L35
- Chain BP
- 50S ribosomal protein L15
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