IL_4V9I_344
3D structure
- PDB id
- 4V9I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CU*AUAAG
- Length
- 7 nucleotides
- Bulged bases
- 4V9I|1|DA|A|2725
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9I_344 not in the Motif Atlas
- Homologous match to IL_7A0S_097
- Geometric discrepancy: 0.082
- The information below is about IL_7A0S_097
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- Multiple bulged bases
- Motif group
- IL_42626.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 14
Unit IDs
4V9I|1|DA|C|2706
4V9I|1|DA|U|2707
*
4V9I|1|DA|A|2722
4V9I|1|DA|U|2723
4V9I|1|DA|A|2724
4V9I|1|DA|A|2725
4V9I|1|DA|G|2726
Current chains
- Chain DA
- 23S ribosomal RNA
Nearby chains
- Chain DR
- 50S ribosomal protein L17
- Chain DT
- 50S ribosomal protein L19
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