IL_4V9I_356

3D structure

PDB id

4V9I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GGGACG*CGGUACC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9I|1|AA|G|445
4V9I|1|AA|G|446
4V9I|1|AA|G|447
4V9I|1|AA|A|448
4V9I|1|AA|C|449
4V9I|1|AA|G|450
*
4V9I|1|AA|C|483
4V9I|1|AA|G|484
4V9I|1|AA|G|485
4V9I|1|AA|U|486
4V9I|1|AA|A|487
4V9I|1|AA|C|488
4V9I|1|AA|C|489

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AD

30S Ribosomal protein S4

Chain AP

30S Ribosomal protein S16