IL_4V9I_364
3D structure
- PDB id
- 4V9I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CGUG*CGCG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9I_364 not in the Motif Atlas
- Geometric match to IL_8C3A_403
- Geometric discrepancy: 0.2577
- The information below is about IL_8C3A_403
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_86374.1
- Basepair signature
- cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
4V9I|1|BB|C|20
4V9I|1|BB|G|21
4V9I|1|BB|U|22
4V9I|1|BB|G|23
*
4V9I|1|BB|C|60
4V9I|1|BB|G|61
4V9I|1|BB|C|62
4V9I|1|BB|G|63
Current chains
- Chain BB
- 5S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: