IL_4V9L_337

3D structure

PDB id

4V9L (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GGAGC*GCGCCGGUGAAAUAC

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9L|1|DA|G|2124
4V9L|1|DA|G|2125
4V9L|1|DA|A|2126
4V9L|1|DA|G|2127
4V9L|1|DA|C|2128
*
4V9L|1|DA|G|2160
4V9L|1|DA|C|2161
4V9L|1|DA|G|2162
4V9L|1|DA|C|2163
4V9L|1|DA|C|2164
4V9L|1|DA|G|2165
4V9L|1|DA|G|2166
4V9L|1|DA|U|2167
4V9L|1|DA|G|2168
4V9L|1|DA|A|2169
4V9L|1|DA|A|2170
4V9L|1|DA|A|2171
4V9L|1|DA|U|2172
4V9L|1|DA|A|2173
4V9L|1|DA|C|2174

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain CW

Transfer RNA; tRNA

Chain DC

50S ribosomal protein L1