IL_4V9L_352

3D structure

PDB id

4V9L (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CUUGAG*CAAGAUGAGG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9L|1|DA|C|2635
4V9L|1|DA|U|2636
4V9L|1|DA|U|2637
4V9L|1|DA|G|2638
4V9L|1|DA|A|2639
4V9L|1|DA|G|2640
*
4V9L|1|DA|C|2774
4V9L|1|DA|A|2775
4V9L|1|DA|A|2776
4V9L|1|DA|G|2777
4V9L|1|DA|A|2778
4V9L|1|DA|U|2779
4V9L|1|DA|G|2780
4V9L|1|DA|A|2781
4V9L|1|DA|G|2782
4V9L|1|DA|G|2783

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain DE

50S ribosomal protein L3

Chain DN

50S ribosomal protein L13