IL_4V9L_374
3D structure
- PDB id
- 4V9L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- ACUCUG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 4V9L|1|BA|G|1992
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9L_374 not in the Motif Atlas
- Homologous match to IL_7A0S_062
- Geometric discrepancy: 0.1201
- The information below is about IL_7A0S_062
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_76758.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 7
Unit IDs
4V9L|1|BA|A|1669
4V9L|1|BA|C|1670
4V9L|1|BA|U|1671
4V9L|1|BA|C|1672
4V9L|1|BA|U|1673
4V9L|1|BA|G|1674
*
4V9L|1|BA|C|1990
4V9L|1|BA|U|1991
4V9L|1|BA|G|1992
4V9L|1|BA|U|1993
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BE
- 50S ribosomal protein L3
- Chain BO
- 50S ribosomal protein L14
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