IL_4V9N_249

3D structure

PDB id

4V9N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CGAACAU*AUAG

Length

11 nucleotides

Bulged bases

4V9N|1|DA|A|271|||V

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9N_249 not in the Motif Atlas

Geometric match to IL_7RQB_011

Geometric discrepancy: 0.1295

The information below is about IL_7RQB_011

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

4V9N|1|DA|C|271|||S
4V9N|1|DA|G|271|||T
4V9N|1|DA|A|271|||U
4V9N|1|DA|A|271|||V
4V9N|1|DA|C|276
4V9N|1|DA|A|277
4V9N|1|DA|U|283
*
4V9N|1|DA|A|357
4V9N|1|DA|U|357|||A
4V9N|1|DA|A|357|||B
4V9N|1|DA|G|357|||C

Current chains

Chain DA

23S ribosomal RNA

Nearby chains