IL_4V9O_012

3D structure

PDB id

4V9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UAG*CAAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9O_012 not in the Motif Atlas

Homologous match to IL_5J7L_254

Geometric discrepancy: 0.1185

The information below is about IL_5J7L_254

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69440.3

Basepair signature

cWW-L-R-cSH-cWW

Number of instances in this motif group

3

Unit IDs

4V9O|1|AA|U|293
4V9O|1|AA|A|294
4V9O|1|AA|G|295
*
4V9O|1|AA|C|343
4V9O|1|AA|A|344
4V9O|1|AA|A|345
4V9O|1|AA|A|346
4V9O|1|AA|A|347

Current chains

Chain AA

23S rRNA

Nearby chains

Chain AU

50S ribosomal protein L24