IL_4V9O_129
3D structure
- PDB id
- 4V9O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Control of ribosomal subunit rotation by elongation factor G
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GGAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 4V9O|1|BA|U|173
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9O_129 not in the Motif Atlas
- Homologous match to IL_5J7L_012
- Geometric discrepancy: 0.0973
- The information below is about IL_5J7L_012
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.6
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 3
Unit IDs
4V9O|1|BA|G|147
4V9O|1|BA|G|148
4V9O|1|BA|A|149
4V9O|1|BA|U|150
4V9O|1|BA|A|151
4V9O|1|BA|A|152
4V9O|1|BA|C|153
*
4V9O|1|BA|G|168
4V9O|1|BA|C|169
4V9O|1|BA|U|170
4V9O|1|BA|A|171
4V9O|1|BA|A|172
4V9O|1|BA|U|173
4V9O|1|BA|A|174
4V9O|1|BA|C|175
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain BT
- 30S ribosomal protein S20
- Chain FA
- Small subunit ribosomal RNA; SSU rRNA
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