IL_4V9O_147

3D structure

PDB id

4V9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GAU*AUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: GAU,AUC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9O_147 not in the Motif Atlas

Geometric match to IL_3LA5_001

Geometric discrepancy: 0.1031

The information below is about IL_3LA5_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

4V9O|1|BA|G|601
4V9O|1|BA|A|602
4V9O|1|BA|U|603
*
4V9O|1|BA|A|635
4V9O|1|BA|U|636
4V9O|1|BA|C|637

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BH

30S ribosomal protein S8

Chain BQ

30S ribosomal protein S17