IL_4V9O_339

3D structure

PDB id

4V9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GUC*GAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: GUC,GAC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9O_339 not in the Motif Atlas

Geometric match to IL_3ICQ_003

Geometric discrepancy: 0.2046

The information below is about IL_3ICQ_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_70707.3

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

70

Unit IDs

4V9O|1|DA|G|988
4V9O|1|DA|U|989
4V9O|1|DA|C|990
*
4V9O|1|DA|G|1215
4V9O|1|DA|A|1216
4V9O|1|DA|C|1217

Current chains

Chain DA

16S rRNA

Nearby chains

Chain DN

30S ribosomal protein S14

Chain DS

30S ribosomal protein S19