IL_4V9O_421

3D structure

PDB id

4V9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

4V9O|1|EA|U|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9O_421 not in the Motif Atlas

Homologous match to IL_5J7L_297

Geometric discrepancy: 0.1017

The information below is about IL_5J7L_297

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

4V9O|1|EA|C|1437
4V9O|1|EA|U|1438
4V9O|1|EA|A|1439
4V9O|1|EA|U|1440
*
4V9O|1|EA|A|1551
4V9O|1|EA|A|1552
4V9O|1|EA|A|1553
4V9O|1|EA|U|1554
4V9O|1|EA|G|1555

Current chains

Chain EA

23S rRNA

Nearby chains