IL_4V9O_590
3D structure
- PDB id
- 4V9O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Control of ribosomal subunit rotation by elongation factor G
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GAAGG*UCGGC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9O_590 not in the Motif Atlas
- Geometric match to IL_5TBW_121
- Geometric discrepancy: 0.3446
- The information below is about IL_5TBW_121
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05145.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
4V9O|1|GA|G|1038
4V9O|1|GA|A|1039
4V9O|1|GA|A|1040
4V9O|1|GA|G|1041
4V9O|1|GA|G|1042
*
4V9O|1|GA|U|1113
4V9O|1|GA|C|1114
4V9O|1|GA|G|1115
4V9O|1|GA|G|1116
4V9O|1|GA|C|1117
Current chains
- Chain GA
- 23S rRNA
Nearby chains
- Chain GG
- 50S ribosomal protein L6
- Chain GM
- 50S ribosomal protein L16
- Chain GV
- 50S ribosomal protein L25
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