IL_4V9O_699

3D structure

PDB id

4V9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UAAG*CUG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9O_699 not in the Motif Atlas

Geometric match to IL_6CZR_136

Geometric discrepancy: 0.2785

The information below is about IL_6CZR_136

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05564.3

Basepair signature

cWW-cSH-cWW-cWW

Number of instances in this motif group

14

Unit IDs

4V9O|1|HA|U|594
4V9O|1|HA|A|595
4V9O|1|HA|A|596
4V9O|1|HA|G|597
*
4V9O|1|HA|C|643
4V9O|1|HA|U|644
4V9O|1|HA|G|645

Current chains

Chain HA

16S rRNA

Nearby chains

Chain HH

30S ribosomal protein S8

Chain HQ

30S ribosomal protein S17