IL_4V9O_750

3D structure

PDB id

4V9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CCC*GCGG

Length

7 nucleotides

Bulged bases

4V9O|1|AA|C|1732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9O_750 not in the Motif Atlas

Geometric match to IL_7MLW_001

Geometric discrepancy: 0.2828

The information below is about IL_7MLW_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

4V9O|1|AA|C|1726
4V9O|1|AA|C|1727
4V9O|1|AA|C|1728
*
4V9O|1|AA|G|1731
4V9O|1|AA|C|1732
4V9O|1|AA|G|1733
4V9O|1|AA|G|1734

Current chains

Chain AA

23S rRNA

Nearby chains