IL_4V9P_044

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GUUG*CAUC

Length

8 nucleotides

Bulged bases

4V9P|1|AA|U|1061

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9P_044 not in the Motif Atlas

Homologous match to IL_5J7L_285

Geometric discrepancy: 0.191

The information below is about IL_5J7L_285

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_92446.2

Basepair signature

cWW-cWW-R-L-L

Number of instances in this motif group

5

Unit IDs

4V9P|1|AA|G|1059
4V9P|1|AA|U|1060
4V9P|1|AA|U|1061
4V9P|1|AA|G|1062
*
4V9P|1|AA|C|1076
4V9P|1|AA|A|1077
4V9P|1|AA|U|1078
4V9P|1|AA|C|1079

Current chains

Chain AA

23S rRNA

Nearby chains

Chain A5

50S ribosomal protein L10

Chain AI

50S ribosomal protein L11

Chain AM

50S ribosomal protein L16