Motif IL_92446.2 Version IL_92446.2 of this group appears in releases 3.89 to 3.97
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 1-7 | 4-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_6PRV_001 | 6PRV | 0.1096 | 1 | A | LSU rRNA | C | 1076 | A | 1077 | U | 1078 | C | 1079 | * | G | 1059 | U | 1060 | G | 1062 | cWW | cWW |
| 2 | IL_1MMS_001 | 1MMS | 0.0000 | 1 | C | 23S RIBOSOMAL RNA | C | 1076 | A | 1077 | U | 1078 | C | 1079 | * | G | 1059 | U | 1060 | G | 1062 | cWW | cWW |
| 3 | IL_5D8H_002 | 5D8H | 0.0944 | 1 | A | LSU rRNA | C | 1186 | A | 1187 | U | 1188 | C | 1189 | * | G | 1169 | U | 1170 | G | 1172 | cWW | cWW |
| 4 | IL_4V9F_110 | 4V9F | 0.1866 | 1 | 0 | LSU rRNA | U | 1180 | A | 1181 | C | 1182 | C | 1183 | * | G | 1163 | U | 1164 | A | 1166 | ncWW | cWW |
| 5 | IL_5J7L_285 | 5J7L | 0.2111 | 1 | DA | LSU rRNA | C | 1076 | A | 1077 | U | 1078 | C | 1079 | * | G | 1059 | U | 1060 | G | 1062 | cWW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAUC*GUUG | 4 |
| UACC*GUGA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AU*UU | 4 |
| AC*UG | 1 |
Release history
| Release | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 |
|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 |
| Status | Updated, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (5)
- Basepair signature
- cWW-cWW-R-L-L
- Heat map statistics
- Min 0.09 | Avg 0.15 | Max 0.25
Coloring options: