IL_4V9P_320

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

AGU*GCU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9P_320 not in the Motif Atlas

Geometric match to IL_4KR9_001

Geometric discrepancy: 0.1675

The information below is about IL_4KR9_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

4V9P|1|DA|A|456
4V9P|1|DA|G|457
4V9P|1|DA|U|458
*
4V9P|1|DA|G|474
4V9P|1|DA|C|475
4V9P|1|DA|U|476

Current chains

Chain DA

16S rRNA

Nearby chains

Chain DP

30S ribosomal protein S16