IL_4V9P_487

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GAAG*CUUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9P_487 not in the Motif Atlas

Geometric match to IL_3WBM_003

Geometric discrepancy: 0.2998

The information below is about IL_3WBM_003

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

4V9P|1|FA|G|76
4V9P|1|FA|A|77
4V9P|1|FA|A|78
4V9P|1|FA|G|79
*
4V9P|1|FA|C|90
4V9P|1|FA|U|91
4V9P|1|FA|U|92
4V9P|1|FA|U|93

Current chains

Chain FA

16S rRNA

Nearby chains

Chain BA

Small subunit ribosomal RNA; SSU rRNA