IL_4V9P_708

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CACG*CCGUG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V9P_708 not in the Motif Atlas

Geometric match to IL_1HYS_004

Geometric discrepancy: 0.3956

The information below is about IL_1HYS_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_64231.5

Basepair signature

cWW-cWW-L-R-L-cWW

Number of instances in this motif group

11

Unit IDs

4V9P|1|HA|C|999
4V9P|1|HA|A|1000
4V9P|1|HA|C|1001
4V9P|1|HA|G|1002
*
4V9P|1|HA|C|1037
4V9P|1|HA|C|1038
4V9P|1|HA|G|1039
4V9P|1|HA|U|1040
4V9P|1|HA|G|1041

Current chains

Chain HA

16S rRNA

Nearby chains