IL_4V9Q_160
3D structure
- PDB id
- 4V9Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GCC*GGU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9Q_160 not in the Motif Atlas
- Geometric match to IL_4KR9_002
- Geometric discrepancy: 0.1758
- The information below is about IL_4KR9_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_86319.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 269
Unit IDs
4V9Q|1|BA|G|1074
4V9Q|1|BA|C|1075
4V9Q|1|BA|C|1076
*
4V9Q|1|BA|G|1081
4V9Q|1|BA|G|1082
4V9Q|1|BA|U|1083
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain BB
- 30S ribosomal protein S2
- Chain BE
- 30S ribosomal protein S5
Coloring options: