IL_4V9Q_213
3D structure
- PDB id
- 4V9Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 4V9Q|1|CA|A|1156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9Q_213 not in the Motif Atlas
- Homologous match to IL_7RQB_036
- Geometric discrepancy: 0.0922
- The information below is about IL_7RQB_036
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 20
Unit IDs
4V9Q|1|CA|C|998
4V9Q|1|CA|U|999
4V9Q|1|CA|A|1000
4V9Q|1|CA|A|1001
4V9Q|1|CA|G|1002
*
4V9Q|1|CA|C|1153
4V9Q|1|CA|G|1154
4V9Q|1|CA|A|1155
4V9Q|1|CA|A|1156
4V9Q|1|CA|G|1157
Current chains
- Chain CA
- 23S ribosomal RNA
Nearby chains
- Chain CB
- 5S ribosomal RNA; 5S rRNA
- Chain CQ
- 50S ribosomal protein L20
- Chain CR
- 50S ribosomal protein L21
- Chain CZ
- 50S ribosomal protein L30
Coloring options: