IL_4V9S_134
3D structure
- PDB id
- 4V9S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of antibiotic GE82832 bound to 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGGAG*CGAAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9S_134 not in the Motif Atlas
- Homologous match to IL_7RQB_075
- Geometric discrepancy: 0.0871
- The information below is about IL_7RQB_075
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_56467.8
- Basepair signature
- cWW-tSH-tSH-tHS-cWW
- Number of instances in this motif group
- 29
Unit IDs
4V9S|1|BA|G|1887
4V9S|1|BA|G|1888
4V9S|1|BA|G|1889
4V9S|1|BA|A|1890
4V9S|1|BA|G|1891
*
4V9S|1|BA|C|1904
4V9S|1|BA|G|1905
4V9S|1|BA|A|1906
4V9S|1|BA|A|1907
4V9S|1|BA|C|1908
Current chains
- Chain BA
- 23S Ribosomal RNA
Nearby chains
- Chain B1
- 50S Ribosomal Protein L28
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