IL_4V9S_156
3D structure
- PDB id
- 4V9S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of antibiotic GE82832 bound to 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UUGAG*CAAGAUGAG
- Length
- 14 nucleotides
- Bulged bases
- 4V9S|1|BA|G|2793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9S_156 not in the Motif Atlas
- Homologous match to IL_7RQB_102
- Geometric discrepancy: 0.045
- The information below is about IL_7RQB_102
- Detailed Annotation
- tSH-tHS-tHW
- Broad Annotation
- tSH-tHS-tHW
- Motif group
- IL_04638.1
- Basepair signature
- cWW-tSH-tHW-tHS-cSH-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
4V9S|1|BA|U|2648
4V9S|1|BA|U|2649
4V9S|1|BA|G|2650
4V9S|1|BA|A|2651
4V9S|1|BA|G|2652
*
4V9S|1|BA|C|2787
4V9S|1|BA|A|2788
4V9S|1|BA|A|2789
4V9S|1|BA|G|2790
4V9S|1|BA|A|2791
4V9S|1|BA|U|2792
4V9S|1|BA|G|2793
4V9S|1|BA|A|2794
4V9S|1|BA|G|2795
Current chains
- Chain BA
- 23S Ribosomal RNA
Nearby chains
- Chain BE
- 50S Ribosomal Protein L3
- Chain BN
- 50S Ribosomal Protein L13
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