IL_4W21_081
3D structure
- PDB id
- 4W21 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2 (this entry contains the large ribosomal subunit RNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GACCCCAGAAAA*UGAAAAUGGAUGGCGC
- Length
- 28 nucleotides
- Bulged bases
- 4W21|1|5|C|1935, 4W21|1|5|G|1940
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_67360.1
- Basepair signature
- cWW-cWW-L-R-R-R-R-R-R-R-R-R-R-R-L-L-L-L-tHH-tHS-cWW
- Number of instances in this motif group
- 1
Unit IDs
4W21|1|5|G|1933
4W21|1|5|A|1934
4W21|1|5|C|1935
4W21|1|5|C|1936
4W21|1|5|C|1937
4W21|1|5|C|1938
4W21|1|5|A|1939
4W21|1|5|G|1940
4W21|1|5|A|1941
4W21|1|5|A|1942
4W21|1|5|A|1943
4W21|1|5|A|1944
*
4W21|1|5|U|2038
4W21|1|5|G|2039
4W21|1|5|A|2040
4W21|1|5|A|2041
4W21|1|5|A|2042
4W21|1|5|A|2043
4W21|1|5|U|2044
4W21|1|5|G|2045
4W21|1|5|G|2046
4W21|1|5|A|2047
4W21|1|5|U|2048
4W21|1|5|G|2049
4W21|1|5|G|2050
4W21|1|5|C|2051
4W21|1|5|G|2052
4W21|1|5|C|2053
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 7
- 5S ribosomal RNA
Coloring options: