IL_4W21_165
3D structure
- PDB id
- 4W21 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2 (this entry contains the large ribosomal subunit RNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UUCGUACGU*AUUGAAAG
- Length
- 17 nucleotides
- Bulged bases
- 4W21|1|5|G|5041
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_33156.1
- Basepair signature
- cWW-L-cWW-cSW-L-R-R-L-cWW-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
4W21|1|5|U|5002
4W21|1|5|U|5003
4W21|1|5|C|5004
4W21|1|5|G|5005
4W21|1|5|U|5006
4W21|1|5|A|5007
4W21|1|5|C|5008
4W21|1|5|G|5009
4W21|1|5|U|5010
*
4W21|1|5|A|5038
4W21|1|5|U|5039
4W21|1|5|U|5040
4W21|1|5|G|5041
4W21|1|5|A|5042
4W21|1|5|A|5043
4W21|1|5|A|5044
4W21|1|5|G|5045
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: