IL_4W21_181

3D structure

PDB id

4W21 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2 (this entry contains the large ribosomal subunit RNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGAUUCAACC*GGCGCAUUUCC

Length

21 nucleotides

Bulged bases

4W21|1|5|A|686

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4W21|1|5|G|464
4W21|1|5|G|465
4W21|1|5|A|466
4W21|1|5|U|467
4W21|1|5|U|468
4W21|1|5|C|469
4W21|1|5|A|470
4W21|1|5|A|471
4W21|1|5|C|472
4W21|1|5|C|473
*
4W21|1|5|G|681
4W21|1|5|G|682
4W21|1|5|C|683
4W21|1|5|G|684
4W21|1|5|C|685
4W21|1|5|A|686
4W21|1|5|U|687
4W21|1|5|U|688
4W21|1|5|U|689
4W21|1|5|C|690
4W21|1|5|C|691

Current chains

Chain 5

28S ribosomal RNA

Nearby chains