IL_4W21_199

3D structure

PDB id

4W21 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2 (this entry contains the large ribosomal subunit RNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUGAAUGUCAAAGUGAA*UUCAAUGAAGCGCG

Length

31 nucleotides

Bulged bases

4W21|1|5|U|3709, 4W21|1|5|U|3713

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4W21|1|5|C|3708
4W21|1|5|U|3709
4W21|1|5|G|3710
4W21|1|5|A|3711
4W21|1|5|A|3712
4W21|1|5|U|3713
4W21|1|5|G|3714
4W21|1|5|U|3715
4W21|1|5|C|3716
4W21|1|5|A|3717
4W21|1|5|A|3718
4W21|1|5|A|3719
4W21|1|5|G|3720
4W21|1|5|U|3721
4W21|1|5|G|3722
4W21|1|5|A|3723
4W21|1|5|A|3724
*
4W21|1|5|U|3729
4W21|1|5|U|3730
4W21|1|5|C|3731
4W21|1|5|A|3732
4W21|1|5|A|3733
4W21|1|5|U|3734
4W21|1|5|G|3735
4W21|1|5|A|3736
4W21|1|5|A|3737
4W21|1|5|G|3738
4W21|1|5|C|3739
4W21|1|5|G|3740
4W21|1|5|C|3741
4W21|1|5|G|3742

Current chains

Chain 5

28S ribosomal RNA

Nearby chains