IL_4W21_200
3D structure
- PDB id
- 4W21 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2 (this entry contains the large ribosomal subunit RNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CCCGGUGAGGC*GCUCCGGG
- Length
- 19 nucleotides
- Bulged bases
- 4W21|1|5|G|4084, 4W21|1|5|G|4086, 4W21|1|5|G|4087, 4W21|1|5|C|4162, 4W21|1|5|U|4163
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4W21|1|5|C|4078
4W21|1|5|C|4079
4W21|1|5|C|4080
4W21|1|5|G|4081
4W21|1|5|G|4082
4W21|1|5|U|4083
4W21|1|5|G|4084
4W21|1|5|A|4085
4W21|1|5|G|4086
4W21|1|5|G|4087
4W21|1|5|C|4088
*
4W21|1|5|G|4161
4W21|1|5|C|4162
4W21|1|5|U|4163
4W21|1|5|C|4164
4W21|1|5|C|4165
4W21|1|5|G|4166
4W21|1|5|G|4167
4W21|1|5|G|4168
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA
Coloring options: