IL_4W23_010
3D structure
- PDB id
- 4W23 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2 (this entry contains the small ribosomal subunit)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UCCUUU*AUUCG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_41366.1
- Basepair signature
- cWW-cWW-L-R-L-cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
4W23|1|2|U|116
4W23|1|2|C|117
4W23|1|2|C|118
4W23|1|2|U|119
4W23|1|2|U|120
4W23|1|2|U|121
*
4W23|1|2|A|343
4W23|1|2|U|344
4W23|1|2|U|345
4W23|1|2|C|346
4W23|1|2|G|347
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain E
- Ribosomal protein eS4
- Chain I
- Ribosomal protein eS8
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