IL_4W29_067
3D structure
- PDB id
- 4W29 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- GGUG*CACC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: GGUG,CACC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4W29_067 not in the Motif Atlas
- Homologous match to IL_4WSM_371
- Geometric discrepancy: 0.5637
- The information below is about IL_4WSM_371
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4W29|1|AX|G|2
4W29|1|AX|G|3
4W29|1|AX|U|4
4W29|1|AX|G|5
*
4W29|1|AX|C|68
4W29|1|AX|A|69
4W29|1|AX|C|70
4W29|1|AX|C|71
Current chains
- Chain AX
- tRNA
Nearby chains
- Chain B0
- 50S ribosomal protein L27
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BQ
- 50S ribosomal protein L16
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