IL_4W29_153
3D structure
- PDB id
- 4W29 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- GCGUAGGAUAG*CC
- Length
- 13 nucleotides
- Bulged bases
- 4W29|1|BA|C|2111, 4W29|1|BA|G|2116, 4W29|1|BA|U|2118
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4W29_153 not in the Motif Atlas
- Homologous match to IL_7RQB_085
- Geometric discrepancy: 0.5707
- The information below is about IL_7RQB_085
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4W29|1|BA|G|2110
4W29|1|BA|C|2111
4W29|1|BA|G|2112
4W29|1|BA|U|2113
4W29|1|BA|A|2114
4W29|1|BA|G|2115
4W29|1|BA|G|2116
4W29|1|BA|A|2117
4W29|1|BA|U|2118
4W29|1|BA|A|2119
4W29|1|BA|G|2120
*
4W29|1|BA|C|2178
4W29|1|BA|C|2179
Current chains
- Chain BA
- 23S Ribosomal RNA
Nearby chains
- Chain AW
- Transfer RNA; tRNA
- Chain BC
- 50S ribosomal protein L1
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