IL_4W29_202
3D structure
- PDB id
- 4W29 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- UUG*CAA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: UUG,CAA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4W29_202 not in the Motif Atlas
- Geometric match to IL_5TBW_034
- Geometric discrepancy: 0.2609
- The information below is about IL_5TBW_034
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
4W29|1|CA|U|252
4W29|1|CA|U|253
4W29|1|CA|G|254
*
4W29|1|CA|C|272
4W29|1|CA|A|273
4W29|1|CA|A|274
Current chains
- Chain CA
- 16S Ribosomal RNA
Nearby chains
- Chain CQ
- 30S ribosomal protein S17
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