IL_4W29_208
3D structure
- PDB id
- 4W29 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- GGAAGAAGC*GUGUAAAC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4W29_208 not in the Motif Atlas
- Geometric match to IL_6CZR_129
- Geometric discrepancy: 0.2565
- The information below is about IL_6CZR_129
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_58819.1
- Basepair signature
- cWW-L-R-tWH-R-L-tHW-tSS-R-L-R-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
4W29|1|CA|G|409
4W29|1|CA|G|410
4W29|1|CA|A|411
4W29|1|CA|A|412
4W29|1|CA|G|413
4W29|1|CA|A|414
4W29|1|CA|A|415
4W29|1|CA|G|416
4W29|1|CA|C|417
*
4W29|1|CA|G|426
4W29|1|CA|U|427
4W29|1|CA|G|428
4W29|1|CA|U|429
4W29|1|CA|A|430
4W29|1|CA|A|431
4W29|1|CA|A|432
4W29|1|CA|C|433
Current chains
- Chain CA
- 16S Ribosomal RNA
Nearby chains
- Chain CD
- 30S ribosomal protein S4
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