IL_4W29_286
3D structure
- PDB id
- 4W29 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- GUGAAG*UGGAGGC
- Length
- 13 nucleotides
- Bulged bases
- 4W29|1|DA|G|729
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4W29_286 not in the Motif Atlas
- Geometric match to IL_4V88_462
- Geometric discrepancy: 0.2677
- The information below is about IL_4V88_462
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_82488.1
- Basepair signature
- cWW-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
4W29|1|DA|G|702
4W29|1|DA|U|703
4W29|1|DA|G|704
4W29|1|DA|A|705
4W29|1|DA|A|706
4W29|1|DA|G|707
*
4W29|1|DA|U|724
4W29|1|DA|G|725
4W29|1|DA|G|726
4W29|1|DA|A|727
4W29|1|DA|G|728
4W29|1|DA|G|729
4W29|1|DA|C|730
Current chains
- Chain DA
- 23S Ribosomal RNA
Nearby chains
- Chain DD
- 50S ribosomal protein L2
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