IL_4W29_344

3D structure

PDB id

4W29 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

CGAAAUUCCUUGU*ACCUG

Length

18 nucleotides

Bulged bases

4W29|1|DA|A|1938, 4W29|1|DA|U|1944, 4W29|1|DA|U|1963

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4W29|1|DA|C|1934
4W29|1|DA|G|1935
4W29|1|DA|A|1936
4W29|1|DA|A|1937
4W29|1|DA|A|1938
4W29|1|DA|U|1939
4W29|1|DA|U|1940
4W29|1|DA|C|1941
4W29|1|DA|C|1942
4W29|1|DA|U|1943
4W29|1|DA|U|1944
4W29|1|DA|G|1945
4W29|1|DA|U|1946
*
4W29|1|DA|A|1960
4W29|1|DA|C|1961
4W29|1|DA|C|1962
4W29|1|DA|U|1963
4W29|1|DA|G|1964

Current chains

Chain DA

23S Ribosomal RNA

Nearby chains

Chain CA

Small subunit ribosomal RNA; SSU rRNA

Chain CX

Transfer RNA; tRNA

Chain DD

50S ribosomal protein L2