IL_4W29_355

3D structure

PDB id

4W29 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

CCUGUGAAC*GGGAGG

Length

15 nucleotides

Bulged bases

4W29|1|DA|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4W29|1|DA|C|2128
4W29|1|DA|C|2129
4W29|1|DA|U|2130
4W29|1|DA|G|2131
4W29|1|DA|U|2132
4W29|1|DA|G|2133
4W29|1|DA|A|2134
4W29|1|DA|A|2135
4W29|1|DA|C|2136
*
4W29|1|DA|G|2155
4W29|1|DA|G|2156
4W29|1|DA|G|2157
4W29|1|DA|A|2158
4W29|1|DA|G|2159
4W29|1|DA|G|2160

Current chains

Chain DA

23S Ribosomal RNA

Nearby chains

Chain DC

50S ribosomal protein L1