IL_4W29_410

3D structure

PDB id

4W29 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

UGAUC*GGUUUG

Length

11 nucleotides

Bulged bases

4W29|1|BA|U|2491

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4W29|1|BA|U|2457
4W29|1|BA|G|2458
4W29|1|BA|A|2459
4W29|1|BA|U|2460
4W29|1|BA|C|2461
*
4W29|1|BA|G|2489
4W29|1|BA|G|2490
4W29|1|BA|U|2491
4W29|1|BA|U|2492
4W29|1|BA|U|2493
4W29|1|BA|G|2494

Current chains

Chain BA

23S Ribosomal RNA

Nearby chains

Chain AX

Transfer RNA; tRNA

Chain B0

50S ribosomal protein L27

Chain BQ

50S ribosomal protein L16