IL_4W29_417

3D structure

PDB id

4W29 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

UGGGGAG*UCCA

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4W29|1|CA|U|772
4W29|1|CA|G|773
4W29|1|CA|G|774
4W29|1|CA|G|775
4W29|1|CA|G|776
4W29|1|CA|A|777
4W29|1|CA|G|778
*
4W29|1|CA|U|804
4W29|1|CA|C|805
4W29|1|CA|C|806
4W29|1|CA|A|807

Current chains

Chain CA

16S Ribosomal RNA

Nearby chains

Chain CK

30S ribosomal protein S11

Chain CO

30S ribosomal protein S15

Chain DA

Large subunit ribosomal RNA; LSU rRNA

Chain DD

50S ribosomal protein L2