IL_4W29_424

3D structure

PDB id

4W29 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

CGCUGACUG*CAGGUGGAG

Length

18 nucleotides

Bulged bases

4W29|1|DA|G|932

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4W29|1|DA|C|844
4W29|1|DA|G|845
4W29|1|DA|C|846
4W29|1|DA|U|847
4W29|1|DA|G|848
4W29|1|DA|A|849
4W29|1|DA|C|850
4W29|1|DA|U|851
4W29|1|DA|G|852
*
4W29|1|DA|C|925
4W29|1|DA|A|926
4W29|1|DA|G|928
4W29|1|DA|G|929
4W29|1|DA|U|930
4W29|1|DA|G|931
4W29|1|DA|G|932
4W29|1|DA|A|933
4W29|1|DA|G|934

Current chains

Chain DA

23S Ribosomal RNA

Nearby chains

Chain D3

50S ribosomal protein L30

Chain DB

5S ribosomal RNA; 5S rRNA