IL_4W2E_077

3D structure

PDB id

4W2E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGG*CCC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: GGG,CCC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4W2E_077 not in the Motif Atlas

Geometric match to IL_4E5C_001

Geometric discrepancy: 0.1514

The information below is about IL_4E5C_001

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10892.2

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

58

Unit IDs

4W2E|1|A|G|1860
4W2E|1|A|G|1861
4W2E|1|A|G|1862
*
4W2E|1|A|C|1880
4W2E|1|A|C|1881
4W2E|1|A|C|1882

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L28