IL_4W2E_092

3D structure

PDB id

4W2E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CGC*GUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4W2E_092 not in the Motif Atlas

Geometric match to IL_8GLP_320

Geometric discrepancy: 0.353

The information below is about IL_8GLP_320

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38565.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

12

Unit IDs

4W2E|1|A|C|2140
4W2E|1|A|G|2141
4W2E|1|A|C|2142
*
4W2E|1|A|G|2149
4W2E|1|A|U|2150
4W2E|1|A|G|2151

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain k

30S ribosomal protein S11