IL_4W2E_189
3D structure
- PDB id
- 4W2E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- UGUAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4W2E_189 not in the Motif Atlas
- Homologous match to IL_9DFE_026
- Geometric discrepancy: 0.0954
- The information below is about IL_9DFE_026
- Detailed Annotation
- 5x5 Sarcin-Ricin with intercalated A; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_38862.5
- Basepair signature
- cWW-cSH-R-tWH-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
4W2E|1|A|U|858
4W2E|1|A|G|859
4W2E|1|A|U|860
4W2E|1|A|A|861
4W2E|1|A|G|862
*
4W2E|1|A|C|915
4W2E|1|A|G|916
4W2E|1|A|A|917
4W2E|1|A|A|918
4W2E|1|A|G|919
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L27
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain Q
- 50S ribosomal protein L16
- Chain Z
- 50S ribosomal protein L25
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